Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 INE1-201ENST00000456273 945 ntBASIC19.37■□□□□ 0.69
ATP2B3Q16720 RN7SL752P-201ENST00000463779 287 ntBASIC19.37■□□□□ 0.69
ATP2B3Q16720 MIR4313-201ENST00000580760 101 ntBASIC19.37■□□□□ 0.69
ATP2B3Q16720 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 KRT17P7-201ENST00000451704 1104 ntBASIC19.36■□□□□ 0.69
ATP2B3Q16720 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 AC104596.2-201ENST00000512793 793 ntBASIC19.36■□□□□ 0.69
ATP2B3Q16720 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 TMEM261P1-201ENST00000604899 340 ntBASIC19.36■□□□□ 0.69
ATP2B3Q16720 IGHV3-72-202ENST00000621503 303 ntBASIC19.36■□□□□ 0.69
ATP2B3Q16720 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATP2B3Q16720 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2B3Q16720 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC024909.3-201ENST00000611513 2257 ntBASIC19.35■□□□□ 0.69
ATP2B3Q16720 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AL603832.2-201ENST00000566195 2125 ntBASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 WFDC1-204ENST00000613603 549 ntBASIC19.35■□□□□ 0.69
ATP2B3Q16720 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ATP2B3Q16720 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2B3Q16720 AC112504.1-201ENST00000623415 1841 ntBASIC19.35■□□□□ 0.69
ATP2B3Q16720 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms