Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.65■□□□□ 0.26
DSC1Q08554 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DSC1Q08554 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 AL355994.2-201ENST00000447882 704 ntBASIC16.65■□□□□ 0.26
DSC1Q08554 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.65■□□□□ 0.26
DSC1Q08554 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.65■□□□□ 0.26
DSC1Q08554 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.65■□□□□ 0.26
DSC1Q08554 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.65■□□□□ 0.26
DSC1Q08554 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.65■□□□□ 0.26
DSC1Q08554 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.65■□□□□ 0.26
DSC1Q08554 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DSC1Q08554 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
DSC1Q08554 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
DSC1Q08554 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
DSC1Q08554 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DSC1Q08554 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.64■□□□□ 0.25
DSC1Q08554 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 FAM21FP-201ENST00000426241 1131 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 C2orf27AP3-201ENST00000434123 579 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DSC1Q08554 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.64■□□□□ 0.25
DSC1Q08554 MIR4538-201ENST00000581377 78 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.64■□□□□ 0.25
DSC1Q08554 AL354718.3-201ENST00000616414 581 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 BX539320.1-201ENST00000623759 877 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 CR382287.1-201ENST00000623954 586 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 AC008687.7-202ENST00000637404 953 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.64■□□□□ 0.25
DSC1Q08554 AL138709.1-201ENST00000614840 1693 ntBASIC16.64■□□□□ 0.25
DSC1Q08554 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
DSC1Q08554 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
DSC1Q08554 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DSC1Q08554 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DSC1Q08554 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DSC1Q08554 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DSC1Q08554 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DSC1Q08554 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.63■□□□□ 0.25
DSC1Q08554 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DSC1Q08554 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.63■□□□□ 0.25
DSC1Q08554 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DSC1Q08554 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DSC1Q08554 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DSC1Q08554 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms