Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
NKX6-1P78426 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NKX6-1P78426 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NKX6-1P78426 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 AC079328.2-201ENST00000561241 3354 ntBASIC14.03□□□□□ -0.16
NKX6-1P78426 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 AL353705.2-201ENST00000428243 662 ntBASIC14.03□□□□□ -0.16
NKX6-1P78426 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX6-1P78426 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 AC009477.1-201ENST00000452936 217 ntBASIC14.03□□□□□ -0.16
NKX6-1P78426 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX6-1P78426 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.03□□□□□ -0.16
NKX6-1P78426 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.03□□□□□ -0.16
NKX6-1P78426 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 AC087499.5-201ENST00000452760 1342 ntBASIC14.03□□□□□ -0.16
NKX6-1P78426 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX6-1P78426 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-1P78426 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
NKX6-1P78426 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX6-1P78426 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NKX6-1P78426 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX6-1P78426 CETN4P-206ENST00000642099 2168 ntBASIC14.02□□□□□ -0.16
NKX6-1P78426 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NKX6-1P78426 AC026691.1-201ENST00000602502 2017 ntBASIC14.02□□□□□ -0.16
NKX6-1P78426 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX6-1P78426 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NKX6-1P78426 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX6-1P78426 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX6-1P78426 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-1P78426 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NKX6-1P78426 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX6-1P78426 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-1P78426 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-1P78426 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-1P78426 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NKX6-1P78426 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-1P78426 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX6-1P78426 AP006294.1-201ENST00000415407 339 ntBASIC14.02□□□□□ -0.17
NKX6-1P78426 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms