Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RAE1P78406 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 KRT18P13-201ENST00000400056 1290 ntBASIC14.99□□□□□ -0.01
RAE1P78406 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.99□□□□□ -0.01
RAE1P78406 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.99□□□□□ -0.01
RAE1P78406 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.99□□□□□ -0.01
RAE1P78406 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.99□□□□□ -0.01
RAE1P78406 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.99□□□□□ -0.01
RAE1P78406 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.99□□□□□ -0.01
RAE1P78406 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
RAE1P78406 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RAE1P78406 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 CETN4P-206ENST00000642099 2168 ntBASIC14.98□□□□□ -0.01
RAE1P78406 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.98□□□□□ -0.01
RAE1P78406 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.98□□□□□ -0.01
RAE1P78406 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.98□□□□□ -0.01
RAE1P78406 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.98□□□□□ -0.01
RAE1P78406 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RAE1P78406 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.98□□□□□ -0.01
RAE1P78406 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.98□□□□□ -0.01
RAE1P78406 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 MST1L-201ENST00000442552 2185 ntBASIC14.98□□□□□ -0.01
RAE1P78406 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAE1P78406 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.97□□□□□ -0.01
RAE1P78406 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 TCAF2P1-201ENST00000291129 2421 ntBASIC14.97□□□□□ -0.01
RAE1P78406 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms