Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AL365209.1-201ENST00000624418 6473 ntBASIC13.84□□□□□ -0.19
HIST1H3AP68431 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AL139400.1-201ENST00000366220 510 ntBASIC13.84□□□□□ -0.19
HIST1H3AP68431 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AL080243.2-201ENST00000418783 582 ntBASIC13.84□□□□□ -0.19
HIST1H3AP68431 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 MTND6P24-201ENST00000440466 518 ntBASIC13.84□□□□□ -0.19
HIST1H3AP68431 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AC109322.1-201ENST00000524499 1264 ntBASIC13.84□□□□□ -0.19
HIST1H3AP68431 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AL596442.2-201ENST00000610240 980 ntBASIC13.84□□□□□ -0.19
HIST1H3AP68431 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H3AP68431 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HIST1H3AP68431 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.83□□□□□ -0.19
HIST1H3AP68431 AL136379.1-201ENST00000623471 2642 ntBASIC13.83□□□□□ -0.19
HIST1H3AP68431 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC009090.5-201ENST00000624886 2285 ntBASIC13.83□□□□□ -0.2
HIST1H3AP68431 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 CETN4P-206ENST00000642099 2168 ntBASIC13.83□□□□□ -0.2
HIST1H3AP68431 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 AC112693.3-201ENST00000624819 1983 ntBASIC13.83□□□□□ -0.2
HIST1H3AP68431 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H3AP68431 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H3AP68431 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms