Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.21□□□□□ -0.3
RIPPLY3P57055 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RIPPLY3P57055 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.21□□□□□ -0.3
RIPPLY3P57055 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.21□□□□□ -0.3
RIPPLY3P57055 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.21□□□□□ -0.3
RIPPLY3P57055 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.21□□□□□ -0.3
RIPPLY3P57055 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RIPPLY3P57055 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 AC007274.2-201ENST00000421675 662 ntBASIC13.2□□□□□ -0.3
RIPPLY3P57055 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 CTBP2P4-201ENST00000513884 920 ntBASIC13.2□□□□□ -0.3
RIPPLY3P57055 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 MIR6069-201ENST00000620069 79 ntBASIC13.2□□□□□ -0.3
RIPPLY3P57055 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIPPLY3P57055 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RIPPLY3P57055 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC126755.1-201ENST00000525846 6405 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AL596276.2-201ENST00000447525 331 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC009486.1-201ENST00000569860 813 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC073352.2-201ENST00000609385 439 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC138649.2-201ENST00000615886 705 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms