Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 KRT18P43-201ENST00000469825 1281 ntBASIC14.3□□□□□ -0.12
SUMO3P55854 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 LINC01115-203ENST00000606068 577 ntBASIC14.3□□□□□ -0.12
SUMO3P55854 AC004461.2-201ENST00000629517 803 ntBASIC14.3□□□□□ -0.12
SUMO3P55854 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.29□□□□□ -0.12
SUMO3P55854 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SUMO3P55854 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.29□□□□□ -0.12
SUMO3P55854 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.29□□□□□ -0.12
SUMO3P55854 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.29□□□□□ -0.12
SUMO3P55854 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SUMO3P55854 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.29□□□□□ -0.12
SUMO3P55854 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 AC135586.1-201ENST00000539323 574 ntBASIC14.29□□□□□ -0.12
SUMO3P55854 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.29□□□□□ -0.12
SUMO3P55854 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.29□□□□□ -0.12
SUMO3P55854 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.29□□□□□ -0.12
SUMO3P55854 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SUMO3P55854 AC015910.1-201ENST00000579400 975 ntBASIC14.29□□□□□ -0.12
SUMO3P55854 AC008738.7-201ENST00000609744 511 ntBASIC14.29□□□□□ -0.12
SUMO3P55854 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.29□□□□□ -0.12
SUMO3P55854 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SUMO3P55854 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.29□□□□□ -0.12
SUMO3P55854 AC087481.3-201ENST00000602886 1894 ntBASIC14.29□□□□□ -0.12
SUMO3P55854 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.29□□□□□ -0.12
SUMO3P55854 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SUMO3P55854 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.28□□□□□ -0.12
SUMO3P55854 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.28□□□□□ -0.12
SUMO3P55854 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.28□□□□□ -0.12
SUMO3P55854 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.28□□□□□ -0.12
SUMO3P55854 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.28□□□□□ -0.12
SUMO3P55854 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 INGX-202ENST00000489074 768 ntBASIC14.28□□□□□ -0.12
SUMO3P55854 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.28□□□□□ -0.12
SUMO3P55854 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 AC092127.1-201ENST00000567093 3455 ntBASIC14.28□□□□□ -0.12
SUMO3P55854 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.28□□□□□ -0.12
SUMO3P55854 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
SUMO3P55854 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.28□□□□□ -0.12
SUMO3P55854 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 AJ011932.1-201ENST00000621707 465 ntBASIC14.28□□□□□ -0.12
SUMO3P55854 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.28□□□□□ -0.12
SUMO3P55854 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms