Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.22■□□□□ 0.03
EPHA4P54764 KRT18P64-201ENST00000434946 1219 ntBASIC15.22■□□□□ 0.03
EPHA4P54764 KRT18P43-201ENST00000469825 1281 ntBASIC15.22■□□□□ 0.03
EPHA4P54764 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.22■□□□□ 0.03
EPHA4P54764 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
EPHA4P54764 AC133539.2-201ENST00000604757 467 ntBASIC15.22■□□□□ 0.03
EPHA4P54764 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 AL596087.1-201ENST00000400979 1969 ntBASIC15.22■□□□□ 0.03
EPHA4P54764 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 ARSEP1-201ENST00000420443 635 ntBASIC15.21■□□□□ 0.03
EPHA4P54764 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA4P54764 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.21■□□□□ 0.03
EPHA4P54764 ATP5G2P4-201ENST00000442175 420 ntBASIC15.21■□□□□ 0.03
EPHA4P54764 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA4P54764 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA4P54764 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA4P54764 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.21■□□□□ 0.03
EPHA4P54764 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA4P54764 AC000095.1-201ENST00000603208 874 ntBASIC15.21■□□□□ 0.03
EPHA4P54764 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
EPHA4P54764 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA4P54764 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA4P54764 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
EPHA4P54764 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
EPHA4P54764 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
EPHA4P54764 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
EPHA4P54764 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA4P54764 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
EPHA4P54764 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA4P54764 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA4P54764 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA4P54764 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA4P54764 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA4P54764 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
EPHA4P54764 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA4P54764 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA4P54764 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
EPHA4P54764 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
EPHA4P54764 KRT8P22-201ENST00000562317 1415 ntBASIC15.2■□□□□ 0.02
EPHA4P54764 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA4P54764 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
EPHA4P54764 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
EPHA4P54764 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
EPHA4P54764 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA4P54764 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms