Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.37■□□□□ 0.05
PDX1P52945 LINC01144-201ENST00000626198 1710 ntBASIC15.37■□□□□ 0.05
PDX1P52945 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.37■□□□□ 0.05
PDX1P52945 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PDX1P52945 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 ANKRD19P-201ENST00000338192 862 ntBASIC15.37■□□□□ 0.05
PDX1P52945 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
PDX1P52945 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.37■□□□□ 0.05
PDX1P52945 CROCCP4-201ENST00000457096 498 ntBASIC15.37■□□□□ 0.05
PDX1P52945 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.37■□□□□ 0.05
PDX1P52945 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.37■□□□□ 0.05
PDX1P52945 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.37■□□□□ 0.05
PDX1P52945 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.37■□□□□ 0.05
PDX1P52945 LINC01115-203ENST00000606068 577 ntBASIC15.37■□□□□ 0.05
PDX1P52945 AL365330.1-201ENST00000607459 531 ntBASIC15.37■□□□□ 0.05
PDX1P52945 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 MIR6775-201ENST00000617557 69 ntBASIC15.37■□□□□ 0.05
PDX1P52945 AL033527.5-201ENST00000641382 801 ntBASIC15.37■□□□□ 0.05
PDX1P52945 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 CLK3P2-201ENST00000427566 1453 ntBASIC15.37■□□□□ 0.05
PDX1P52945 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.37■□□□□ 0.05
PDX1P52945 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDX1P52945 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PDX1P52945 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDX1P52945 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
PDX1P52945 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDX1P52945 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.36■□□□□ 0.05
PDX1P52945 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 AC234783.1-201ENST00000441761 496 ntBASIC15.36■□□□□ 0.05
PDX1P52945 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.36■□□□□ 0.05
PDX1P52945 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.36■□□□□ 0.05
PDX1P52945 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.36■□□□□ 0.05
PDX1P52945 TIMM17BP1-201ENST00000545713 516 ntBASIC15.36■□□□□ 0.05
PDX1P52945 AC092552.1-201ENST00000547243 906 ntBASIC15.36■□□□□ 0.05
PDX1P52945 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
PDX1P52945 AC010319.3-201ENST00000597028 470 ntBASIC15.36■□□□□ 0.05
PDX1P52945 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.36■□□□□ 0.05
PDX1P52945 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.36■□□□□ 0.05
PDX1P52945 AL596087.1-201ENST00000400979 1969 ntBASIC15.36■□□□□ 0.05
PDX1P52945 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
PDX1P52945 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDX1P52945 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.36■□□□□ 0.05
PDX1P52945 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms