Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.7□□□□□ -0.22
HCFC1P51610 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.7□□□□□ -0.22
HCFC1P51610 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HCFC1P51610 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 AP001282.1-201ENST00000531301 1499 ntBASIC13.7□□□□□ -0.22
HCFC1P51610 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 CICP6-201ENST00000457191 2729 ntBASIC13.7□□□□□ -0.22
HCFC1P51610 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 RNU1-114P-201ENST00000365297 166 ntBASIC13.69□□□□□ -0.22
HCFC1P51610 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 CYP2T1P-202ENST00000641596 2535 ntBASIC13.69□□□□□ -0.22
HCFC1P51610 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 CNN2P10-201ENST00000443067 918 ntBASIC13.69□□□□□ -0.22
HCFC1P51610 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 RHOQP1-201ENST00000555758 579 ntBASIC13.69□□□□□ -0.22
HCFC1P51610 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HCFC1P51610 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCFC1P51610 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HCFC1P51610 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.69□□□□□ -0.22
HCFC1P51610 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.69□□□□□ -0.22
HCFC1P51610 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HCFC1P51610 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 AC005052.1-201ENST00000625181 2492 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 AC138932.1-201ENST00000534164 6830 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HCFC1P51610 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms