Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 FAM220BP-201ENST00000377689 816 ntBASIC14.79□□□□□ -0.04
RNF144AP50876 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF144AP50876 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF144AP50876 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF144AP50876 AC068418.2-201ENST00000577309 3703 ntBASIC14.79□□□□□ -0.04
RNF144AP50876 AC024267.1-201ENST00000582320 895 ntBASIC14.79□□□□□ -0.04
RNF144AP50876 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.79□□□□□ -0.04
RNF144AP50876 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF144AP50876 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF144AP50876 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF144AP50876 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RNF144AP50876 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.78□□□□□ -0.04
RNF144AP50876 SPDYE14P-201ENST00000442619 822 ntBASIC14.78□□□□□ -0.04
RNF144AP50876 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RNF144AP50876 AP000344.2-201ENST00000512987 629 ntBASIC14.78□□□□□ -0.04
RNF144AP50876 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 AC026150.2-201ENST00000564693 1156 ntBASIC14.78□□□□□ -0.04
RNF144AP50876 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RNF144AP50876 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RNF144AP50876 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF144AP50876 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RNF144AP50876 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
RNF144AP50876 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF144AP50876 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
RNF144AP50876 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF144AP50876 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF144AP50876 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms