Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 C2orf27AP3-201ENST00000434123 579 ntBASIC18.72■□□□□ 0.59
TNNI2P48788 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.72■□□□□ 0.59
TNNI2P48788 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.72■□□□□ 0.59
TNNI2P48788 AL354718.3-201ENST00000616414 581 ntBASIC18.72■□□□□ 0.59
TNNI2P48788 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 CR382287.1-201ENST00000623954 586 ntBASIC18.72■□□□□ 0.59
TNNI2P48788 RHOXF1P1-202ENST00000635473 501 ntBASIC18.72■□□□□ 0.59
TNNI2P48788 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 AL121723.1-201ENST00000445194 1519 ntBASIC18.72■□□□□ 0.59
TNNI2P48788 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.72■□□□□ 0.59
TNNI2P48788 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 AC099398.1-201ENST00000567919 2776 ntBASIC18.72■□□□□ 0.59
TNNI2P48788 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.72■□□□□ 0.59
TNNI2P48788 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNNI2P48788 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.72■□□□□ 0.59
TNNI2P48788 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TNNI2P48788 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.71■□□□□ 0.59
TNNI2P48788 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TNNI2P48788 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
TNNI2P48788 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.71■□□□□ 0.59
TNNI2P48788 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.71■□□□□ 0.59
TNNI2P48788 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.71■□□□□ 0.59
TNNI2P48788 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.71■□□□□ 0.59
TNNI2P48788 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.71■□□□□ 0.59
TNNI2P48788 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 AC093813.1-201ENST00000605066 256 ntBASIC18.71■□□□□ 0.59
TNNI2P48788 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TNNI2P48788 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 AC092364.2-201ENST00000596710 2692 ntBASIC18.71■□□□□ 0.59
TNNI2P48788 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.71■□□□□ 0.59
TNNI2P48788 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TNNI2P48788 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNNI2P48788 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.71■□□□□ 0.59
TNNI2P48788 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TNNI2P48788 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TNNI2P48788 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.7■□□□□ 0.58
TNNI2P48788 ACKR1-201ENST00000368121 1240 ntBASIC18.7■□□□□ 0.58
TNNI2P48788 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.7■□□□□ 0.58
TNNI2P48788 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 AC245100.3-201ENST00000441281 285 ntBASIC18.7■□□□□ 0.58
TNNI2P48788 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.7■□□□□ 0.58
TNNI2P48788 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 AC106760.1-201ENST00000508690 800 ntBASIC18.7■□□□□ 0.58
TNNI2P48788 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.7■□□□□ 0.58
TNNI2P48788 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.7■□□□□ 0.58
TNNI2P48788 AC097359.3-201ENST00000603982 1210 ntBASIC18.7■□□□□ 0.58
TNNI2P48788 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 AL607033.1-201ENST00000623900 1599 ntBASIC18.7■□□□□ 0.58
TNNI2P48788 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms