Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC6A12P48065 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A12P48065 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC6A12P48065 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A12P48065 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC6A12P48065 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC6A12P48065 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC6A12P48065 AL158211.3-201ENST00000607385 239 ntBASIC15.24■□□□□ 0.03
SLC6A12P48065 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC6A12P48065 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC6A12P48065 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A12P48065 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A12P48065 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A12P48065 AC126365.1-201ENST00000578585 1514 ntBASIC15.23■□□□□ 0.03
SLC6A12P48065 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 KRT18P28-201ENST00000453838 1332 ntBASIC15.23■□□□□ 0.03
SLC6A12P48065 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SLC6A12P48065 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC6A12P48065 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A12P48065 KRT18P64-201ENST00000434946 1219 ntBASIC15.23■□□□□ 0.03
SLC6A12P48065 RPL13P2-201ENST00000440687 659 ntBASIC15.23■□□□□ 0.03
SLC6A12P48065 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC6A12P48065 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A12P48065 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 RN7SL618P-201ENST00000477850 296 ntBASIC15.23■□□□□ 0.03
SLC6A12P48065 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC6A12P48065 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC6A12P48065 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A12P48065 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC6A12P48065 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A12P48065 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC6A12P48065 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A12P48065 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A12P48065 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A12P48065 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A12P48065 AC087499.5-201ENST00000452760 1342 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC6A12P48065 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A12P48065 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SLC6A12P48065 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.22■□□□□ 0.03
SLC6A12P48065 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC6A12P48065 METTL21AP1-201ENST00000438852 635 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC6A12P48065 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 FAM86GP-201ENST00000448322 971 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 AC097493.3-201ENST00000509725 367 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms