Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.04□□□□□ -0.32
NKX2-1P43699 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 FGD5P1-202ENST00000614866 2498 ntBASIC13.04□□□□□ -0.32
NKX2-1P43699 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.04□□□□□ -0.32
NKX2-1P43699 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX2-1P43699 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 MTDHP3-201ENST00000594186 672 ntBASIC13.04□□□□□ -0.32
NKX2-1P43699 AC092119.3-201ENST00000612618 583 ntBASIC13.04□□□□□ -0.32
NKX2-1P43699 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
NKX2-1P43699 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 WASH6P-202ENST00000359512 1437 ntBASIC13.04□□□□□ -0.32
NKX2-1P43699 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX2-1P43699 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX2-1P43699 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX2-1P43699 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NKX2-1P43699 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NKX2-1P43699 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NKX2-1P43699 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX2-1P43699 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NKX2-1P43699 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX2-1P43699 RNU1-129P-201ENST00000384064 167 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 UPK3BP1-201ENST00000428678 509 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX2-1P43699 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 RPS15P9-201ENST00000494093 319 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX2-1P43699 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.03□□□□□ -0.32
NKX2-1P43699 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX2-1P43699 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX2-1P43699 U1.21-201ENST00000580816 167 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX2-1P43699 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.03□□□□□ -0.32
NKX2-1P43699 AC006557.2-201ENST00000592985 1240 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 AC138894.3-201ENST00000603787 634 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 AC093458.2-201ENST00000623150 629 ntBASIC13.03□□□□□ -0.32
NKX2-1P43699 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX2-1P43699 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX2-1P43699 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms