Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 AC144831.1-201ENST00000573312 2656 ntBASIC16.94■□□□□ 0.3
SSR1P43307 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SSR1P43307 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 AC134407.2-201ENST00000625089 1978 ntBASIC16.93■□□□□ 0.3
SSR1P43307 CICP13-201ENST00000422015 2789 ntBASIC16.93■□□□□ 0.3
SSR1P43307 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SSR1P43307 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SSR1P43307 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.93■□□□□ 0.3
SSR1P43307 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 SPDYE11-202ENST00000450699 704 ntBASIC16.93■□□□□ 0.3
SSR1P43307 AC245100.5-201ENST00000452108 331 ntBASIC16.93■□□□□ 0.3
SSR1P43307 AC098859.1-201ENST00000502915 1238 ntBASIC16.93■□□□□ 0.3
SSR1P43307 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.93■□□□□ 0.3
SSR1P43307 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.93■□□□□ 0.3
SSR1P43307 AC105233.2-201ENST00000523697 349 ntBASIC16.93■□□□□ 0.3
SSR1P43307 KRT18P58-201ENST00000527480 1120 ntBASIC16.93■□□□□ 0.3
SSR1P43307 AF228730.5-201ENST00000530288 346 ntBASIC16.93■□□□□ 0.3
SSR1P43307 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
SSR1P43307 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.93■□□□□ 0.3
SSR1P43307 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.93■□□□□ 0.3
SSR1P43307 AC040169.1-201ENST00000565382 521 ntBASIC16.93■□□□□ 0.3
SSR1P43307 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.93■□□□□ 0.3
SSR1P43307 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.93■□□□□ 0.3
SSR1P43307 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.93■□□□□ 0.3
SSR1P43307 SPDYE9P-201ENST00000570642 692 ntBASIC16.93■□□□□ 0.3
SSR1P43307 SPDYE10P-202ENST00000612005 668 ntBASIC16.93■□□□□ 0.3
SSR1P43307 SPDYE8P-202ENST00000612377 668 ntBASIC16.93■□□□□ 0.3
SSR1P43307 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.93■□□□□ 0.3
SSR1P43307 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.93■□□□□ 0.3
SSR1P43307 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 AKAP8P1-201ENST00000434743 1349 ntBASIC16.93■□□□□ 0.3
SSR1P43307 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSR1P43307 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.92■□□□□ 0.3
SSR1P43307 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.92■□□□□ 0.3
SSR1P43307 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 RNA5SP410-201ENST00000516285 106 ntBASIC16.92■□□□□ 0.3
SSR1P43307 FAM86C2P-203ENST00000528684 1004 ntBASIC16.92■□□□□ 0.3
SSR1P43307 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.92■□□□□ 0.3
SSR1P43307 AC092902.6-201ENST00000641783 218 ntBASIC16.92■□□□□ 0.3
SSR1P43307 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms