Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.36■□□□□ 0.37
HTTP42858 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 AC005332.8-201ENST00000622750 2735 ntBASIC17.35■□□□□ 0.37
HTTP42858 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.35■□□□□ 0.37
HTTP42858 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 RNMTL1P1-201ENST00000454103 560 ntBASIC17.35■□□□□ 0.37
HTTP42858 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
HTTP42858 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.35■□□□□ 0.37
HTTP42858 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.35■□□□□ 0.37
HTTP42858 AC006453.1-201ENST00000636037 1257 ntBASIC17.35■□□□□ 0.37
HTTP42858 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.35■□□□□ 0.37
HTTP42858 AC025271.4-201ENST00000621477 1726 ntBASIC17.35■□□□□ 0.37
HTTP42858 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTTP42858 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.35■□□□□ 0.37
HTTP42858 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.35■□□□□ 0.37
HTTP42858 KRT8P14-201ENST00000414254 1442 ntBASIC17.35■□□□□ 0.37
HTTP42858 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.35■□□□□ 0.37
HTTP42858 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.35■□□□□ 0.37
HTTP42858 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.35■□□□□ 0.37
HTTP42858 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTTP42858 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTTP42858 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HTTP42858 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 AC104073.2-201ENST00000453737 312 ntBASIC17.34■□□□□ 0.37
HTTP42858 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.34■□□□□ 0.37
HTTP42858 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 AC012044.1-201ENST00000603431 297 ntBASIC17.34■□□□□ 0.37
HTTP42858 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 AL158070.2-201ENST00000623713 1621 ntBASIC17.34■□□□□ 0.37
HTTP42858 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.34■□□□□ 0.37
HTTP42858 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
HTTP42858 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.34■□□□□ 0.37
HTTP42858 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.34■□□□□ 0.37
HTTP42858 AC092364.2-201ENST00000596710 2692 ntBASIC17.34■□□□□ 0.37
HTTP42858 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTTP42858 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HTTP42858 PHKG1P2-201ENST00000457537 863 ntBASIC17.34■□□□□ 0.37
HTTP42858 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HTTP42858 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HTTP42858 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HTTP42858 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.33■□□□□ 0.37
HTTP42858 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HTTP42858 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.33■□□□□ 0.37
HTTP42858 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HTTP42858 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.33■□□□□ 0.37
HTTP42858 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HTTP42858 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
HTTP42858 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.33■□□□□ 0.37
HTTP42858 AC005324.6-201ENST00000587972 613 ntBASIC17.33■□□□□ 0.37
HTTP42858 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.33■□□□□ 0.37
HTTP42858 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.33■□□□□ 0.37
HTTP42858 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms