Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.05■□□□□ 0.32
TNFSF9P41273 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
TNFSF9P41273 AC087499.6-201ENST00000411576 835 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TNFSF9P41273 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 MYCLP2-201ENST00000449268 967 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 RN7SL399P-201ENST00000471648 279 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 ELK1P1-201ENST00000485699 580 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TNFSF9P41273 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.05■□□□□ 0.32
TNFSF9P41273 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.05■□□□□ 0.32
TNFSF9P41273 CTBP2P3-201ENST00000585629 1255 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TNFSF9P41273 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TNFSF9P41273 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 AC127383.1-201ENST00000444697 1800 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TNFSF9P41273 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.04■□□□□ 0.32
TNFSF9P41273 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.04■□□□□ 0.32
TNFSF9P41273 AC093726.1-201ENST00000608064 963 ntBASIC17.04■□□□□ 0.32
TNFSF9P41273 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TNFSF9P41273 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TNFSF9P41273 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TNFSF9P41273 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFSF9P41273 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFSF9P41273 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFSF9P41273 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFSF9P41273 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFSF9P41273 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFSF9P41273 RN7SL692P-201ENST00000464677 288 ntBASIC17.03■□□□□ 0.32
TNFSF9P41273 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFSF9P41273 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.03■□□□□ 0.32
TNFSF9P41273 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
TNFSF9P41273 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFSF9P41273 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNFSF9P41273 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
TNFSF9P41273 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TNFSF9P41273 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFSF9P41273 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFSF9P41273 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.03■□□□□ 0.32
TNFSF9P41273 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFSF9P41273 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms