Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRPHP41219 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRPHP41219 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.86■□□□□ 0.45
PRPHP41219 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.86■□□□□ 0.45
PRPHP41219 AL645939.2-201ENST00000427340 991 ntBASIC17.86■□□□□ 0.45
PRPHP41219 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.86■□□□□ 0.45
PRPHP41219 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.86■□□□□ 0.45
PRPHP41219 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.86■□□□□ 0.45
PRPHP41219 AC027369.6-201ENST00000525520 931 ntBASIC17.86■□□□□ 0.45
PRPHP41219 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.86■□□□□ 0.45
PRPHP41219 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PRPHP41219 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.86■□□□□ 0.45
PRPHP41219 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
PRPHP41219 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 AC087481.3-201ENST00000602886 1894 ntBASIC17.86■□□□□ 0.45
PRPHP41219 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRPHP41219 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.86■□□□□ 0.45
PRPHP41219 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PRPHP41219 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PRPHP41219 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.85■□□□□ 0.45
PRPHP41219 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.85■□□□□ 0.45
PRPHP41219 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 TREML5P-201ENST00000421694 576 ntBASIC17.85■□□□□ 0.45
PRPHP41219 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.85■□□□□ 0.45
PRPHP41219 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.85■□□□□ 0.45
PRPHP41219 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.85■□□□□ 0.45
PRPHP41219 RN7SL618P-201ENST00000477850 296 ntBASIC17.85■□□□□ 0.45
PRPHP41219 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.85■□□□□ 0.45
PRPHP41219 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.85■□□□□ 0.45
PRPHP41219 AL844908.2-201ENST00000609461 460 ntBASIC17.85■□□□□ 0.45
PRPHP41219 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.85■□□□□ 0.45
PRPHP41219 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.85■□□□□ 0.45
PRPHP41219 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.85■□□□□ 0.45
PRPHP41219 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PRPHP41219 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRPHP41219 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 AC136621.1-201ENST00000624017 2304 ntBASIC17.84■□□□□ 0.45
PRPHP41219 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.84■□□□□ 0.45
PRPHP41219 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
PRPHP41219 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PRPHP41219 AC063926.3-201ENST00000624734 5658 ntBASIC17.84■□□□□ 0.45
PRPHP41219 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.84■□□□□ 0.45
PRPHP41219 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PRPHP41219 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.84■□□□□ 0.45
PRPHP41219 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.84■□□□□ 0.45
PRPHP41219 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PRPHP41219 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRPHP41219 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms