Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPDP35247 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 AL365203.3-201ENST00000609742 2057 ntBASIC14.38□□□□□ -0.11
SFTPDP35247 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.38□□□□□ -0.11
SFTPDP35247 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SFTPDP35247 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SFTPDP35247 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPDP35247 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPDP35247 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SFTPDP35247 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.37□□□□□ -0.11
SFTPDP35247 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SFTPDP35247 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.37□□□□□ -0.11
SFTPDP35247 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.37□□□□□ -0.11
SFTPDP35247 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.37□□□□□ -0.11
SFTPDP35247 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.37□□□□□ -0.11
SFTPDP35247 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 AL512361.1-201ENST00000554200 418 ntBASIC14.37□□□□□ -0.11
SFTPDP35247 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SFTPDP35247 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.37□□□□□ -0.11
SFTPDP35247 AL450472.2-201ENST00000603663 1156 ntBASIC14.37□□□□□ -0.11
SFTPDP35247 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SFTPDP35247 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SFTPDP35247 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPDP35247 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPDP35247 TSPY26P-202ENST00000565928 3884 ntBASIC14.37□□□□□ -0.11
SFTPDP35247 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SFTPDP35247 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SFTPDP35247 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 FO393414.2-201ENST00000405153 598 ntBASIC14.36□□□□□ -0.11
SFTPDP35247 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPDP35247 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.36□□□□□ -0.11
SFTPDP35247 EEF1DP4-201ENST00000446006 880 ntBASIC14.36□□□□□ -0.11
SFTPDP35247 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 PHKG1P2-201ENST00000457537 863 ntBASIC14.36□□□□□ -0.11
SFTPDP35247 INGX-202ENST00000489074 768 ntBASIC14.36□□□□□ -0.11
SFTPDP35247 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPDP35247 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.36□□□□□ -0.11
SFTPDP35247 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPDP35247 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.36□□□□□ -0.11
SFTPDP35247 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SFTPDP35247 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms