Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.57□□□□□ -0.08
SHC1P29353 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.57□□□□□ -0.08
SHC1P29353 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.57□□□□□ -0.08
SHC1P29353 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHC1P29353 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SHC1P29353 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SHC1P29353 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHC1P29353 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHC1P29353 AL136982.4-201ENST00000437689 1740 ntBASIC14.56□□□□□ -0.08
SHC1P29353 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 SPDYE7P-202ENST00000420373 878 ntBASIC14.56□□□□□ -0.08
SHC1P29353 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.56□□□□□ -0.08
SHC1P29353 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 CNN2P2-201ENST00000443536 909 ntBASIC14.56□□□□□ -0.08
SHC1P29353 CNN2P3-201ENST00000450201 906 ntBASIC14.56□□□□□ -0.08
SHC1P29353 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.56□□□□□ -0.08
SHC1P29353 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.56□□□□□ -0.08
SHC1P29353 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.56□□□□□ -0.08
SHC1P29353 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.56□□□□□ -0.08
SHC1P29353 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.56□□□□□ -0.08
SHC1P29353 AC105021.1-202ENST00000570572 669 ntBASIC14.56□□□□□ -0.08
SHC1P29353 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.56□□□□□ -0.08
SHC1P29353 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.56□□□□□ -0.08
SHC1P29353 AL136317.3-201ENST00000618497 906 ntBASIC14.56□□□□□ -0.08
SHC1P29353 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 TUBB3P1-201ENST00000405796 1332 ntBASIC14.56□□□□□ -0.08
SHC1P29353 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SHC1P29353 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.56□□□□□ -0.08
SHC1P29353 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHC1P29353 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.56□□□□□ -0.08
SHC1P29353 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SHC1P29353 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 AP003680.1-201ENST00000598970 3660 ntBASIC14.55□□□□□ -0.08
SHC1P29353 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 AC069224.1-201ENST00000566372 1715 ntBASIC14.55□□□□□ -0.08
SHC1P29353 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SHC1P29353 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.55□□□□□ -0.08
SHC1P29353 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.55□□□□□ -0.08
SHC1P29353 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SHC1P29353 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.55□□□□□ -0.08
SHC1P29353 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.55□□□□□ -0.08
SHC1P29353 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 AL645939.2-201ENST00000427340 991 ntBASIC14.55□□□□□ -0.08
SHC1P29353 AL353705.2-201ENST00000428243 662 ntBASIC14.55□□□□□ -0.08
SHC1P29353 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.55□□□□□ -0.08
SHC1P29353 AC051619.7-201ENST00000568314 623 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms