Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMLP26374 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.05■□□□□ 0.64
CHMLP26374 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMLP26374 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMLP26374 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMLP26374 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMLP26374 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHMLP26374 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 TNRC18P2-201ENST00000417666 2714 ntBASIC19.04■□□□□ 0.64
CHMLP26374 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMLP26374 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHMLP26374 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMLP26374 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMLP26374 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMLP26374 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMLP26374 AC025678.2-201ENST00000562061 970 ntBASIC19.04■□□□□ 0.64
CHMLP26374 AC004449.1-201ENST00000564240 433 ntBASIC19.04■□□□□ 0.64
CHMLP26374 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMLP26374 AC139530.3-201ENST00000620344 690 ntBASIC19.04■□□□□ 0.64
CHMLP26374 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHMLP26374 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMLP26374 AC006058.4-201ENST00000624016 1670 ntBASIC19.04■□□□□ 0.64
CHMLP26374 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHMLP26374 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHMLP26374 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHMLP26374 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHMLP26374 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMLP26374 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMLP26374 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMLP26374 KLF2P3-201ENST00000451977 1087 ntBASIC19.03■□□□□ 0.64
CHMLP26374 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHMLP26374 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMLP26374 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHMLP26374 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMLP26374 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMLP26374 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CHMLP26374 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMLP26374 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHMLP26374 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMLP26374 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMLP26374 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMLP26374 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMLP26374 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMLP26374 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMLP26374 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMLP26374 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMLP26374 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMLP26374 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms