Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
KCNA3P22001 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 POM121L8P-201ENST00000417732 1281 ntBASIC19.08■□□□□ 0.64
KCNA3P22001 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 POM121L9P-203ENST00000441984 1285 ntBASIC19.08■□□□□ 0.64
KCNA3P22001 KRT18P66-201ENST00000452970 1269 ntBASIC19.08■□□□□ 0.64
KCNA3P22001 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.08■□□□□ 0.64
KCNA3P22001 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
KCNA3P22001 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.08■□□□□ 0.64
KCNA3P22001 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 BNIP3P13-201ENST00000599968 566 ntBASIC19.08■□□□□ 0.64
KCNA3P22001 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.08■□□□□ 0.64
KCNA3P22001 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 KRT8P4-201ENST00000509735 1454 ntBASIC19.08■□□□□ 0.64
KCNA3P22001 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KCNA3P22001 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
KCNA3P22001 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KCNA3P22001 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KCNA3P22001 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNA3P22001 AC005052.1-201ENST00000625181 2492 ntBASIC19.07■□□□□ 0.64
KCNA3P22001 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNA3P22001 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.07■□□□□ 0.64
KCNA3P22001 CEP164P1-201ENST00000455142 418 ntBASIC19.07■□□□□ 0.64
KCNA3P22001 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.07■□□□□ 0.64
KCNA3P22001 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNA3P22001 AL391280.1-201ENST00000506969 1062 ntBASIC19.07■□□□□ 0.64
KCNA3P22001 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNA3P22001 AC103988.2-201ENST00000561804 725 ntBASIC19.07■□□□□ 0.64
KCNA3P22001 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.07■□□□□ 0.64
KCNA3P22001 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 ZACNP1-201ENST00000612259 710 ntBASIC19.07■□□□□ 0.64
KCNA3P22001 RN7SL736P-201ENST00000613111 269 ntBASIC19.07■□□□□ 0.64
KCNA3P22001 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNA3P22001 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNA3P22001 KRT8P29-201ENST00000420409 1371 ntBASIC19.06■□□□□ 0.64
KCNA3P22001 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KCNA3P22001 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KCNA3P22001 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 AL627389.1-201ENST00000413508 1182 ntBASIC19.06■□□□□ 0.64
KCNA3P22001 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 NPM1P43-201ENST00000558669 786 ntBASIC19.06■□□□□ 0.64
KCNA3P22001 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.06■□□□□ 0.64
KCNA3P22001 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.06■□□□□ 0.64
KCNA3P22001 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 OR10B1P-201ENST00000601666 907 ntBASIC19.06■□□□□ 0.64
KCNA3P22001 AL353770.1-201ENST00000614915 403 ntBASIC19.06■□□□□ 0.64
KCNA3P22001 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNA3P22001 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
KCNA3P22001 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.05■□□□□ 0.64
KCNA3P22001 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNA3P22001 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNA3P22001 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KCNA3P22001 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KCNA3P22001 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNA3P22001 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.05■□□□□ 0.64
KCNA3P22001 AC011742.3-201ENST00000439053 820 ntBASIC19.05■□□□□ 0.64
KCNA3P22001 AC104073.2-201ENST00000453737 312 ntBASIC19.05■□□□□ 0.64
KCNA3P22001 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNA3P22001 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNA3P22001 AC013355.1-201ENST00000562625 723 ntBASIC19.05■□□□□ 0.64
KCNA3P22001 AL023803.2-201ENST00000620080 638 ntBASIC19.05■□□□□ 0.64
KCNA3P22001 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.05■□□□□ 0.64
KCNA3P22001 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms