Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 AC126755.1-201ENST00000525846 6405 ntBASIC14.76□□□□□ -0.05
TNFRSF1BP20333 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 LINC00528-201ENST00000600723 2160 ntBASIC14.76□□□□□ -0.05
TNFRSF1BP20333 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 AC098859.1-201ENST00000502915 1238 ntBASIC14.76□□□□□ -0.05
TNFRSF1BP20333 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 AC073389.1-201ENST00000595595 795 ntBASIC14.76□□□□□ -0.05
TNFRSF1BP20333 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF1BP20333 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AC023908.3-201ENST00000564211 3047 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AC002056.1-201ENST00000395613 760 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 RPL13AP23-201ENST00000480739 586 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 KRT126P-201ENST00000549467 1181 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 RARRES2P8-201ENST00000566335 367 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AGAP7P-201ENST00000582299 2062 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AGAP14-201ENST00000624701 2060 ntBASIC14.75□□□□□ -0.05
TNFRSF1BP20333 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TNFRSF1BP20333 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TNFRSF1BP20333 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms