Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SYN1P17600 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SYN1P17600 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 ACTBP8-201ENST00000403258 1108 ntBASIC17.01■□□□□ 0.31
SYN1P17600 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 KLF2P2-201ENST00000416807 1039 ntBASIC17.01■□□□□ 0.31
SYN1P17600 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.01■□□□□ 0.31
SYN1P17600 AC098935.1-201ENST00000446057 611 ntBASIC17.01■□□□□ 0.31
SYN1P17600 RN7SL181P-201ENST00000462921 277 ntBASIC17.01■□□□□ 0.31
SYN1P17600 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.01■□□□□ 0.31
SYN1P17600 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.01■□□□□ 0.31
SYN1P17600 NPM1P43-201ENST00000558669 786 ntBASIC17.01■□□□□ 0.31
SYN1P17600 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.01■□□□□ 0.31
SYN1P17600 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SYN1P17600 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.01■□□□□ 0.31
SYN1P17600 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.01■□□□□ 0.31
SYN1P17600 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SYN1P17600 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.01■□□□□ 0.31
SYN1P17600 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17■□□□□ 0.31
SYN1P17600 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17■□□□□ 0.31
SYN1P17600 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17■□□□□ 0.31
SYN1P17600 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SYN1P17600 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17■□□□□ 0.31
SYN1P17600 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17■□□□□ 0.31
SYN1P17600 RN7SL8P-201ENST00000461771 266 ntBASIC17■□□□□ 0.31
SYN1P17600 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SYN1P17600 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SYN1P17600 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
SYN1P17600 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17■□□□□ 0.31
SYN1P17600 RN7SL48P-201ENST00000579283 293 ntBASIC17■□□□□ 0.31
SYN1P17600 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17■□□□□ 0.31
SYN1P17600 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17■□□□□ 0.31
SYN1P17600 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SYN1P17600 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SYN1P17600 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SYN1P17600 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SYN1P17600 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SYN1P17600 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SYN1P17600 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
SYN1P17600 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 AL627389.1-201ENST00000413508 1182 ntBASIC16.99■□□□□ 0.31
SYN1P17600 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.99■□□□□ 0.31
SYN1P17600 FAM8A4P-201ENST00000435433 1213 ntBASIC16.99■□□□□ 0.31
SYN1P17600 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.99■□□□□ 0.31
SYN1P17600 AC021723.1-201ENST00000486306 515 ntBASIC16.99■□□□□ 0.31
SYN1P17600 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.99■□□□□ 0.31
SYN1P17600 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SYN1P17600 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 AL161670.2-201ENST00000557650 1227 ntBASIC16.99■□□□□ 0.31
SYN1P17600 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SYN1P17600 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 AC097359.3-201ENST00000603982 1210 ntBASIC16.99■□□□□ 0.31
SYN1P17600 AC100757.4-201ENST00000626934 759 ntBASIC16.99■□□□□ 0.31
SYN1P17600 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYN1P17600 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SYN1P17600 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.99■□□□□ 0.31
SYN1P17600 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms