Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCNYL3P0C7X3 AC105917.1-201ENST00000506637 2539 ntBASIC15.38■□□□□ 0.05
CCNYL3P0C7X3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCNYL3P0C7X3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCNYL3P0C7X3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCNYL3P0C7X3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCNYL3P0C7X3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 NME2P1-201ENST00000426182 414 ntBASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 AC008738.7-201ENST00000609744 511 ntBASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 AC022188.1-201ENST00000620960 1664 ntBASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCNYL3P0C7X3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 AL031731.1-201ENST00000642131 2094 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 AC087499.6-201ENST00000411576 835 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 AL080243.2-201ENST00000418783 582 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 AL132655.2-201ENST00000596276 594 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.36■□□□□ 0.05
CCNYL3P0C7X3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms