Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD74P04233 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CD74P04233 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD74P04233 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CD74P04233 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD74P04233 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.35□□□□□ -0.27
CD74P04233 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.35□□□□□ -0.27
CD74P04233 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD74P04233 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD74P04233 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CD74P04233 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 WASH3P-207ENST00000560956 1394 ntBASIC13.34□□□□□ -0.27
CD74P04233 FO538757.1-201ENST00000623083 1397 ntBASIC13.34□□□□□ -0.27
CD74P04233 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CD74P04233 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 AL691432.1-201ENST00000596308 1422 ntBASIC13.34□□□□□ -0.27
CD74P04233 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CD74P04233 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.34□□□□□ -0.27
CD74P04233 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.34□□□□□ -0.27
CD74P04233 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.34□□□□□ -0.27
CD74P04233 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.34□□□□□ -0.27
CD74P04233 AC092119.3-201ENST00000612618 583 ntBASIC13.34□□□□□ -0.27
CD74P04233 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CD74P04233 PMS2P7-201ENST00000506558 1336 ntBASIC13.34□□□□□ -0.27
CD74P04233 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD74P04233 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.34□□□□□ -0.27
CD74P04233 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.34□□□□□ -0.27
CD74P04233 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CD74P04233 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CD74P04233 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.33□□□□□ -0.27
CD74P04233 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD74P04233 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD74P04233 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.33□□□□□ -0.28
CD74P04233 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 BX640514.1-201ENST00000583223 1918 ntBASIC13.33□□□□□ -0.28
CD74P04233 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CD74P04233 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 CXCL1P1-201ENST00000502804 216 ntBASIC13.33□□□□□ -0.28
CD74P04233 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.33□□□□□ -0.28
CD74P04233 FOSL1P1-201ENST00000511041 816 ntBASIC13.33□□□□□ -0.28
CD74P04233 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.33□□□□□ -0.28
CD74P04233 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.33□□□□□ -0.28
CD74P04233 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CD74P04233 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms