Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC1P02654 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
APOC1P02654 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC1P02654 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC1P02654 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TFAMP1-201ENST00000412727 736 ntBASIC14.09□□□□□ -0.15
APOC1P02654 ACTG1P14-201ENST00000446382 1122 ntBASIC14.09□□□□□ -0.15
APOC1P02654 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC1P02654 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.09□□□□□ -0.15
APOC1P02654 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC1P02654 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC1P02654 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.09□□□□□ -0.15
APOC1P02654 AC099522.2-201ENST00000607001 744 ntBASIC14.09□□□□□ -0.15
APOC1P02654 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC1P02654 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
APOC1P02654 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.09□□□□□ -0.15
APOC1P02654 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
APOC1P02654 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC1P02654 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC1P02654 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC1P02654 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.08□□□□□ -0.15
APOC1P02654 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
APOC1P02654 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC1P02654 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.08□□□□□ -0.15
APOC1P02654 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.08□□□□□ -0.15
APOC1P02654 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APOC1P02654 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC1P02654 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
APOC1P02654 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
APOC1P02654 AL355306.1-201ENST00000415580 579 ntBASIC14.08□□□□□ -0.16
APOC1P02654 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.08□□□□□ -0.16
APOC1P02654 GPX1P2-201ENST00000429271 606 ntBASIC14.08□□□□□ -0.16
APOC1P02654 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
APOC1P02654 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC1P02654 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC1P02654 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.08□□□□□ -0.16
APOC1P02654 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.08□□□□□ -0.16
APOC1P02654 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC1P02654 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms