Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 MIR770-201ENST00000390219 98 ntBASIC17■□□□□ 0.31
HLA-DRAP01903 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 MRPS18AP1-201ENST00000414458 589 ntBASIC17■□□□□ 0.31
HLA-DRAP01903 RPL13P2-201ENST00000440687 659 ntBASIC17■□□□□ 0.31
HLA-DRAP01903 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DRAP01903 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DRAP01903 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DRAP01903 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DRAP01903 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 AC046158.3-201ENST00000624947 2558 ntBASIC17■□□□□ 0.31
HLA-DRAP01903 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HLA-DRAP01903 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 HYMAI-201ENST00000635591 3347 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 AC114501.2-201ENST00000439631 535 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 SLED1-202ENST00000512051 380 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 AC004461.2-201ENST00000629517 803 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 AC004840.1-201ENST00000636359 365 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 AC090616.6-203ENST00000579186 1945 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.99■□□□□ 0.31
HLA-DRAP01903 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DRAP01903 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DRAP01903 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DRAP01903 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DRAP01903 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms