Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.32□□□□□ -0.28
SIX6O95475 AP000867.4-201ENST00000641616 219 ntBASIC13.32□□□□□ -0.28
SIX6O95475 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SIX6O95475 AC097359.2-201ENST00000604992 2389 ntBASIC13.32□□□□□ -0.28
SIX6O95475 AL356585.2-201ENST00000625078 2396 ntBASIC13.32□□□□□ -0.28
SIX6O95475 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 KRT17P2-201ENST00000300992 1314 ntBASIC13.32□□□□□ -0.28
SIX6O95475 KRT18P22-201ENST00000402024 1347 ntBASIC13.32□□□□□ -0.28
SIX6O95475 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SIX6O95475 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 INTS4P1-201ENST00000438455 1935 ntBASIC13.31□□□□□ -0.28
SIX6O95475 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SIX6O95475 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.31□□□□□ -0.28
SIX6O95475 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.31□□□□□ -0.28
SIX6O95475 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SIX6O95475 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.31□□□□□ -0.28
SIX6O95475 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
SIX6O95475 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.31□□□□□ -0.28
SIX6O95475 SNORA78-201ENST00000459373 127 ntBASIC13.31□□□□□ -0.28
SIX6O95475 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.31□□□□□ -0.28
SIX6O95475 AC139887.4-201ENST00000607877 719 ntBASIC13.31□□□□□ -0.28
SIX6O95475 HYMAI.1-201ENST00000620949 238 ntBASIC13.31□□□□□ -0.28
SIX6O95475 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIX6O95475 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SIX6O95475 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 SIGLEC16-201ENST00000599858 1437 ntBASIC13.3□□□□□ -0.28
SIX6O95475 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.3□□□□□ -0.28
SIX6O95475 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.3□□□□□ -0.28
SIX6O95475 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 PAWRP1-201ENST00000451083 565 ntBASIC13.3□□□□□ -0.28
SIX6O95475 AC087163.2-201ENST00000457299 853 ntBASIC13.3□□□□□ -0.28
SIX6O95475 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.3□□□□□ -0.28
SIX6O95475 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 AC090616.6-201ENST00000582640 721 ntBASIC13.3□□□□□ -0.28
SIX6O95475 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.3□□□□□ -0.28
SIX6O95475 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SIX6O95475 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
SIX6O95475 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.3□□□□□ -0.28
SIX6O95475 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SIX6O95475 ZBED1P1-201ENST00000502364 1930 ntBASIC13.3□□□□□ -0.28
SIX6O95475 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms