Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 UNC93B6-202ENST00000528242 690 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 AC107918.2-201ENST00000530817 355 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.15■□□□□ 0.02
CLOCKO15516 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.15■□□□□ 0.02
CLOCKO15516 AC005412.3-201ENST00000580309 715 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.15■□□□□ 0.02
CLOCKO15516 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.15■□□□□ 0.02
CLOCKO15516 AL805961.1-202ENST00000641562 540 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLOCKO15516 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
CLOCKO15516 AC105250.1-201ENST00000509378 2057 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.14■□□□□ 0.01
CLOCKO15516 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 AC007686.3-201ENST00000619017 3487 ntBASIC15.14■□□□□ 0.01
CLOCKO15516 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 AC007191.1-201ENST00000623179 2995 ntBASIC15.14■□□□□ 0.01
CLOCKO15516 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.14■□□□□ 0.01
CLOCKO15516 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 AC007967.2-201ENST00000432613 625 ntBASIC15.14■□□□□ 0.01
CLOCKO15516 AL591424.1-201ENST00000442569 1213 ntBASIC15.14■□□□□ 0.01
CLOCKO15516 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 AC034105.1-201ENST00000563488 319 ntBASIC15.14■□□□□ 0.01
CLOCKO15516 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.14■□□□□ 0.01
CLOCKO15516 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.14■□□□□ 0.01
CLOCKO15516 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLOCKO15516 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.14■□□□□ 0.01
CLOCKO15516 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CLOCKO15516 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.13■□□□□ 0.01
CLOCKO15516 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLOCKO15516 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CLOCKO15516 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.13■□□□□ 0.01
CLOCKO15516 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLOCKO15516 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.13■□□□□ 0.01
CLOCKO15516 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLOCKO15516 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.13■□□□□ 0.01
CLOCKO15516 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.13■□□□□ 0.01
CLOCKO15516 KRT18P3-201ENST00000451602 1288 ntBASIC15.13■□□□□ 0.01
CLOCKO15516 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CLOCKO15516 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.13■□□□□ 0.01
CLOCKO15516 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.13■□□□□ 0.01
CLOCKO15516 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLOCKO15516 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CLOCKO15516 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.13■□□□□ 0.01
CLOCKO15516 FAM197Y3-203ENST00000618346 717 ntBASIC15.13■□□□□ 0.01
CLOCKO15516 AC139530.3-201ENST00000620344 690 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms