Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC21.42■■□□□ 1.02
CHD2O14647 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CHD2O14647 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.42■■□□□ 1.02
CHD2O14647 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD2O14647 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD2O14647 AC018470.1-201ENST00000624790 3129 ntBASIC21.41■■□□□ 1.02
CHD2O14647 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC21.41■■□□□ 1.02
CHD2O14647 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD2O14647 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.41■■□□□ 1.02
CHD2O14647 IGHV3-37-201ENST00000518544 340 ntBASIC21.41■■□□□ 1.02
CHD2O14647 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC21.41■■□□□ 1.02
CHD2O14647 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
CHD2O14647 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CHD2O14647 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD2O14647 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD2O14647 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD2O14647 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD2O14647 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD2O14647 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD2O14647 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CHD2O14647 AC010141.1-201ENST00000411585 623 ntBASIC21.4■■□□□ 1.02
CHD2O14647 AC078991.1-201ENST00000437297 610 ntBASIC21.4■■□□□ 1.02
CHD2O14647 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD2O14647 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.4■■□□□ 1.02
CHD2O14647 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD2O14647 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD2O14647 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
CHD2O14647 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD2O14647 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.4■■□□□ 1.02
CHD2O14647 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD2O14647 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.4■■□□□ 1.02
CHD2O14647 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CHD2O14647 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHD2O14647 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD2O14647 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD2O14647 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD2O14647 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD2O14647 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21.39■■□□□ 1.02
CHD2O14647 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC21.39■■□□□ 1.02
CHD2O14647 VDAC1P1-201ENST00000439229 848 ntBASIC21.39■■□□□ 1.02
CHD2O14647 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.39■■□□□ 1.02
CHD2O14647 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.39■■□□□ 1.02
CHD2O14647 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21.39■■□□□ 1.02
CHD2O14647 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHD2O14647 AL805961.1-201ENST00000642026 753 ntBASIC21.39■■□□□ 1.02
CHD2O14647 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC21.39■■□□□ 1.01
CHD2O14647 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHD2O14647 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CHD2O14647 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.39■■□□□ 1.01
CHD2O14647 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHD2O14647 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.39■■□□□ 1.01
CHD2O14647 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD2O14647 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD2O14647 PKD1P6-201ENST00000343738 4769 ntBASIC21.39■■□□□ 1.01
CHD2O14647 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHD2O14647 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.39■■□□□ 1.01
CHD2O14647 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.39■■□□□ 1.01
CHD2O14647 TUBB8P8-201ENST00000458717 1058 ntBASIC21.39■■□□□ 1.01
CHD2O14647 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.39■■□□□ 1.01
CHD2O14647 RPL17P45-201ENST00000586289 509 ntBASIC21.39■■□□□ 1.01
CHD2O14647 AL132994.2-201ENST00000603120 687 ntBASIC21.39■■□□□ 1.01
CHD2O14647 AC087045.2-201ENST00000606279 1003 ntBASIC21.39■■□□□ 1.01
CHD2O14647 AP001065.2-201ENST00000617205 644 ntBASIC21.39■■□□□ 1.01
CHD2O14647 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.38■■□□□ 1.01
CHD2O14647 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC21.38■■□□□ 1.01
CHD2O14647 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CHD2O14647 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.38■■□□□ 1.01
CHD2O14647 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms