Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.04■□□□□ -0
UPK1AO00322 AL359258.3-201ENST00000622910 2331 ntBASIC15.04■□□□□ -0
UPK1AO00322 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 AC009090.5-201ENST00000624886 2285 ntBASIC15.04■□□□□ -0
UPK1AO00322 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.04■□□□□ -0
UPK1AO00322 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1AO00322 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 AL136982.4-201ENST00000437689 1740 ntBASIC15.03■□□□□ -0
UPK1AO00322 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
UPK1AO00322 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
UPK1AO00322 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.03■□□□□ -0
UPK1AO00322 ALG1L8P-201ENST00000533887 760 ntBASIC15.03■□□□□ -0
UPK1AO00322 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.03■□□□□ -0
UPK1AO00322 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1AO00322 LINC00552-201ENST00000625151 2579 ntBASIC15.03■□□□□ -0
UPK1AO00322 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1AO00322 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UPK1AO00322 BNIP3P1-202ENST00000550043 1585 ntBASIC15.02■□□□□ -0
UPK1AO00322 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UPK1AO00322 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
UPK1AO00322 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UPK1AO00322 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UPK1AO00322 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.02■□□□□ -0
UPK1AO00322 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.02■□□□□ -0
UPK1AO00322 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UPK1AO00322 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.02■□□□□ -0
UPK1AO00322 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
UPK1AO00322 RPS8P6-201ENST00000426177 609 ntBASIC15.02■□□□□ -0
UPK1AO00322 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1AO00322 GPS2P2-201ENST00000430745 888 ntBASIC15.02■□□□□ -0
UPK1AO00322 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.02■□□□□ -0
UPK1AO00322 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.02■□□□□ -0
UPK1AO00322 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.02■□□□□ -0
UPK1AO00322 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.02■□□□□ -0
UPK1AO00322 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
UPK1AO00322 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UPK1AO00322 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.02■□□□□ -0
UPK1AO00322 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1AO00322 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
UPK1AO00322 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1AO00322 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UPK1AO00322 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1AO00322 LINC00528-201ENST00000600723 2160 ntBASIC15.02□□□□□ -0.01
UPK1AO00322 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1AO00322 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1AO00322 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1AO00322 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
UPK1AO00322 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1AO00322 AGAP7P-201ENST00000582299 2062 ntBASIC15.02□□□□□ -0.01
UPK1AO00322 AGAP14-201ENST00000624701 2060 ntBASIC15.02□□□□□ -0.01
UPK1AO00322 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
UPK1AO00322 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.02□□□□□ -0.01
UPK1AO00322 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1AO00322 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
UPK1AO00322 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1AO00322 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.02□□□□□ -0.01
UPK1AO00322 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UPK1AO00322 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UPK1AO00322 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms