Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 AC020916.1-201ENST00000587762 1774 ntBASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AP000356.3-201ENST00000382243 753 ntBASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AL160314.3-201ENST00000556041 767 ntBASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AC106820.3-201ENST00000561653 397 ntBASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 FO393412.1-201ENST00000619841 382 ntBASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM88BA6NKF7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AL390961.4-201ENST00000623958 2535 ntBASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AL139094.1-201ENST00000405549 1188 ntBASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 GHSR-202ENST00000427970 912 ntBASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AC138894.2-201ENST00000602838 371 ntBASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AL132780.4-201ENST00000624870 1135 ntBASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM88BA6NKF7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 POU5F1P2-201ENST00000521750 823 ntBASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM88BA6NKF7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms