Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SMS-201ENST00000379404 1174 ntTSL 3 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 MIR33B-201ENST00000385104 96 ntBASIC21.11■□□□□ 0.97
SBNO1A3KN83 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 RN7SL720P-201ENST00000488178 304 ntBASIC21.11■□□□□ 0.97
SBNO1A3KN83 AC044849.1-201ENST00000519737 1188 ntBASIC21.11■□□□□ 0.97
SBNO1A3KN83 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 AC244157.2-201ENST00000616239 1006 ntBASIC21.11■□□□□ 0.97
SBNO1A3KN83 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 AC148477.4-201ENST00000613430 1793 ntBASIC21.11■□□□□ 0.97
SBNO1A3KN83 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SBNO1A3KN83 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.11■□□□□ 0.97
SBNO1A3KN83 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 TPM3P8-201ENST00000330554 643 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 NKAIN1P1-201ENST00000435754 582 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 SPTLC1P5-201ENST00000450718 252 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 FADS2-212ENST00000522639 360 ntTSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 FADS2-215ENST00000574708 385 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SBNO1A3KN83 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 AC245884.6-201ENST00000515672 1067 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC21.1■□□□□ 0.97
SBNO1A3KN83 AC007663.3-201ENST00000609632 465 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 ENPP7P14-201ENST00000621765 1040 ntBASIC21.1■□□□□ 0.97
SBNO1A3KN83 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SBNO1A3KN83 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.09■□□□□ 0.97
SBNO1A3KN83 AC104457.1-201ENST00000401024 814 ntBASIC21.09■□□□□ 0.97
SBNO1A3KN83 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms