Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 TMPOP1-202ENST00000424642 1267 ntBASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 AL009183.1-201ENST00000603760 355 ntBASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 AL928921.2-201ENST00000641325 2442 ntBASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV3S1A0A5B6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TCRBV3S1A0A5B6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV3S1A0A5B6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV3S1A0A5B6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV3S1A0A5B6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 LINC01230-201ENST00000625222 3017 ntBASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 AC004790.2-201ENST00000623588 572 ntBASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV3S1A0A5B6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms