Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC145285.3-201ENST00000564603 959 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC018845.2-201ENST00000568326 409 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC024267.1-201ENST00000582320 895 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 SLC25A6P4-201ENST00000586535 553 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC068137.2-201ENST00000605408 478 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AJ011931.1-201ENST00000618749 2492 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC034105.1-201ENST00000563488 319 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC061975.2-201ENST00000581722 295 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 C8orf49-201ENST00000525043 1968 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 KRT8P44-201ENST00000441609 1350 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AL691432.1-201ENST00000596308 1422 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC126365.1-201ENST00000578585 1514 ntBASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-7A0A0A0MS04 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms