Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 MIR1247-201ENST00000408206 136 ntBASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 AC091271.1-201ENST00000611877 1162 ntBASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC187A0A096LP49 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 GPAA1P2-201ENST00000417923 928 ntBASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AC097359.3-201ENST00000603982 1210 ntBASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms