Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AC008132.1-202ENST00000342005 1389 ntBASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AC005915.1-201ENST00000624912 2018 ntBASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 NUP210P1-202ENST00000504322 710 ntBASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AL450472.2-201ENST00000603663 1156 ntBASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 AL592424.1-201ENST00000563624 1536 ntBASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCH2Q9Y6C5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 AC026471.1-201ENST00000564629 3026 ntBASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 TPM3P8-201ENST00000330554 643 ntBASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 AC244157.2-201ENST00000616239 1006 ntBASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCH2Q9Y6C5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 AC106820.2-201ENST00000563775 3264 ntBASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 AC007274.2-201ENST00000421675 662 ntBASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 GAPDHP40-201ENST00000505218 1006 ntBASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 AC024681.1-201ENST00000521917 487 ntBASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCH2Q9Y6C5 AC097359.3-201ENST00000603982 1210 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms