Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 HLA-F-220ENST00000434407 884 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AC020765.3-201ENST00000613051 740 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 AC069152.1-201ENST00000438030 544 ntBASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 NEK4P2-201ENST00000580004 1012 ntBASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 TOP3BP1-201ENST00000420768 1380 ntBASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAPPC1Q9Y5R8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 HBZP1-201ENST00000354915 429 ntBASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM220CP-201ENST00000395253 831 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms