Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC008764.6-201ENST00000595909 2069 ntBASIC17.72■□□□□ 0.43
TRIM17Q9Y577 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AL138799.1-201ENST00000448213 1675 ntBASIC17.72■□□□□ 0.43
TRIM17Q9Y577 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC234782.1-201ENST00000451950 919 ntBASIC17.72■□□□□ 0.43
TRIM17Q9Y577 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC005730.2-201ENST00000564549 1184 ntBASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 AC073352.2-201ENST00000609385 439 ntBASIC17.72■□□□□ 0.43
TRIM17Q9Y577 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM17Q9Y577 PKD1P1-201ENST00000458669 6805 ntBASIC17.71■□□□□ 0.43
TRIM17Q9Y577 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 ACTBP8-201ENST00000403258 1108 ntBASIC17.71■□□□□ 0.43
TRIM17Q9Y577 RPL13AP19-201ENST00000434320 584 ntBASIC17.71■□□□□ 0.43
TRIM17Q9Y577 AC011742.3-201ENST00000439053 820 ntBASIC17.71■□□□□ 0.43
TRIM17Q9Y577 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 AC134043.2-201ENST00000624206 2238 ntBASIC17.71■□□□□ 0.43
TRIM17Q9Y577 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM17Q9Y577 GGT3P-204ENST00000453783 1664 ntBASIC17.71■□□□□ 0.42
TRIM17Q9Y577 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 AC100757.4-201ENST00000626934 759 ntBASIC17.7■□□□□ 0.42
TRIM17Q9Y577 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM17Q9Y577 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms