Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RRP7BP-205ENST00000566851 833 ntBASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 MYCLP2-201ENST00000449268 967 ntBASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 AC092658.1-201ENST00000505836 891 ntBASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 TPRX2P-201ENST00000535362 881 ntBASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.41■□□□□ 0.86
PDZRN3Q9UPQ7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 AC007389.4-201ENST00000454674 793 ntBASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 AL512343.1-201ENST00000605837 169 ntBASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZRN3Q9UPQ7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
PDZRN3Q9UPQ7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 BOLA2P3-201ENST00000404566 256 ntBASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms