Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 MTND6P24-201ENST00000440466 518 ntBASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 AL079307.3-201ENST00000556114 283 ntBASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 AC069224.1-201ENST00000566372 1715 ntBASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 KRT8P12-202ENST00000472924 1397 ntBASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 FO538757.1-201ENST00000623083 1397 ntBASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 CYMP-203ENST00000474680 1263 ntBASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 AL589739.1-201ENST00000607720 493 ntBASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 AC073592.8-201ENST00000624126 511 ntBASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.56■□□□□ 0.24
PPARGC1AQ9UBK2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 AC011477.6-201ENST00000604980 1927 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 DUX4L27-201ENST00000554796 1261 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 AC027796.2-201ENST00000575326 344 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 AC106028.4-201ENST00000614509 607 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 AC093512.1-201ENST00000617969 520 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 SPDYE12P-201ENST00000618416 771 ntBASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.55■□□□□ 0.24
PPARGC1AQ9UBK2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms