Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 AC106760.1-201ENST00000508690 800 ntBASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 MIR6869-201ENST00000619434 62 ntBASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 LINC00554-201ENST00000564841 3011 ntBASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 TUBB1P2-201ENST00000422712 1306 ntBASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 TUBB1P1-201ENST00000503144 1300 ntBASIC16.44■□□□□ 0.22
DNMT3BQ9UBC3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 AL355994.2-201ENST00000447882 704 ntBASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 KRT18P43-201ENST00000469825 1281 ntBASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 AC244669.2-201ENST00000612320 853 ntBASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 GPR182-203ENST00000622922 591 ntBASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNMT3BQ9UBC3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AC016694.1-201ENST00000434179 700 ntBASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AC092364.2-201ENST00000596710 2692 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms