Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
MKS1Q9NXB0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
MKS1Q9NXB0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
MKS1Q9NXB0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 PDPK2P-202ENST00000562415 1191 ntBASIC15.64■□□□□ 0.09
MKS1Q9NXB0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 AC011467.4-201ENST00000594891 528 ntBASIC15.64■□□□□ 0.09
MKS1Q9NXB0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 AC008267.7-201ENST00000624570 1194 ntBASIC15.64■□□□□ 0.09
MKS1Q9NXB0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.64■□□□□ 0.09
MKS1Q9NXB0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 AC093909.1-201ENST00000504731 1122 ntBASIC15.63■□□□□ 0.09
MKS1Q9NXB0 RNA5SP410-201ENST00000516285 106 ntBASIC15.63■□□□□ 0.09
MKS1Q9NXB0 AC112191.1-201ENST00000523689 701 ntBASIC15.63■□□□□ 0.09
MKS1Q9NXB0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 AC064836.3-201ENST00000607928 673 ntBASIC15.63■□□□□ 0.09
MKS1Q9NXB0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
MKS1Q9NXB0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.62■□□□□ 0.09
MKS1Q9NXB0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MKS1Q9NXB0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms