Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 HIST3H2BA-201ENST00000436555 524 ntBASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SERPINA7P1-201ENST00000443077 631 ntBASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 IGHV3-42-201ENST00000520410 361 ntBASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AL158211.3-201ENST00000607385 239 ntBASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 AP005117.1-202ENST00000581724 1908 ntBASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CUEDC1Q9NWM3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUEDC1Q9NWM3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 AC063926.3-201ENST00000624734 5658 ntBASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUEDC1Q9NWM3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms