Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 AL133267.1-201ENST00000398220 340 ntBASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 MEP1AP4-201ENST00000423244 1087 ntBASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 KRT18P43-201ENST00000469825 1281 ntBASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 RARRES2P5-201ENST00000564013 466 ntBASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 AC015910.1-201ENST00000579400 975 ntBASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 AC092850.2-201ENST00000623821 2697 ntBASIC16.12■□□□□ 0.17
TMEM248Q9NWD8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 AL121723.1-201ENST00000445194 1519 ntBASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 TERF1P3-201ENST00000505638 1227 ntBASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 AC004233.3-201ENST00000607794 1269 ntBASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 PAUPAR-201ENST00000630360 2965 ntBASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TMEM248Q9NWD8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC020658.6-201ENST00000623564 1870 ntBASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 DFFBP1-201ENST00000433250 979 ntBASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC055876.2-201ENST00000531834 546 ntBASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC000095.1-201ENST00000603208 874 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms