Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 LINC02447-202ENST00000501888 2146 ntBASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SPHK2Q9NRA0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AC005229.1-201ENST00000392885 409 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 BCRP2-202ENST00000447763 634 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 BCRP6-201ENST00000510112 632 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 BCRP7-201ENST00000511549 544 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AP001889.1-201ENST00000525414 633 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AP001063.1-201ENST00000568332 529 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AC093813.1-201ENST00000605066 256 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 AC005252.2-201ENST00000624630 1141 ntBASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPHK2Q9NRA0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 ANKRD19P-201ENST00000338192 862 ntBASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 BAATP1-201ENST00000412284 1225 ntBASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 AL355864.2-201ENST00000447420 863 ntBASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPHK2Q9NRA0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms