Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 AC023310.1-201ENST00000554836 735 ntBASIC16.72■□□□□ 0.27
TLR9Q9NR96 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 CICP6-201ENST00000457191 2729 ntBASIC16.72■□□□□ 0.27
TLR9Q9NR96 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR9Q9NR96 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TLR9Q9NR96 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC005052.1-201ENST00000625181 2492 ntBASIC16.71■□□□□ 0.27
TLR9Q9NR96 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC006033.1-201ENST00000440505 426 ntBASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC026410.3-201ENST00000514280 936 ntBASIC16.71■□□□□ 0.27
TLR9Q9NR96 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 RHOQP1-201ENST00000555758 579 ntBASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 AC093813.1-201ENST00000605066 256 ntBASIC16.71■□□□□ 0.27
TLR9Q9NR96 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR9Q9NR96 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.71■□□□□ 0.26
TLR9Q9NR96 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TLR9Q9NR96 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TLR9Q9NR96 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.26
TLR9Q9NR96 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TLR9Q9NR96 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 CNN2P8-201ENST00000421872 913 ntBASIC16.7■□□□□ 0.26
TLR9Q9NR96 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 KRT8P13-201ENST00000463294 1010 ntBASIC16.7■□□□□ 0.26
TLR9Q9NR96 ZNF767P-206ENST00000513792 565 ntBASIC16.7■□□□□ 0.26
TLR9Q9NR96 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 C2orf69P2-201ENST00000562032 1123 ntBASIC16.7■□□□□ 0.26
TLR9Q9NR96 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.7■□□□□ 0.26
TLR9Q9NR96 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms