Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.02■□□□□ -0
NEUROD4Q9HD90 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.02■□□□□ -0
NEUROD4Q9HD90 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.02■□□□□ -0
NEUROD4Q9HD90 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 AL136982.4-201ENST00000437689 1740 ntBASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 AC105250.1-201ENST00000509378 2057 ntBASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NEUROD4Q9HD90 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AC136621.1-201ENST00000624017 2304 ntBASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 KRT8P37-201ENST00000451609 1420 ntBASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 SLC25A39P2-201ENST00000537614 270 ntBASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 RARRES2P9-201ENST00000565168 469 ntBASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AL450472.2-201ENST00000603663 1156 ntBASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.01□□□□□ -0.01
NEUROD4Q9HD90 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15□□□□□ -0.01
NEUROD4Q9HD90 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15□□□□□ -0.01
NEUROD4Q9HD90 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms