Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIF1Q9H611 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.23■□□□□ 0.03
PIF1Q9H611 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.23■□□□□ 0.03
PIF1Q9H611 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 FDX1P1-201ENST00000449115 551 ntBASIC15.23■□□□□ 0.03
PIF1Q9H611 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.23■□□□□ 0.03
PIF1Q9H611 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.23■□□□□ 0.03
PIF1Q9H611 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.23■□□□□ 0.03
PIF1Q9H611 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
PIF1Q9H611 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PIF1Q9H611 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PIF1Q9H611 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PIF1Q9H611 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 C18orf15-201ENST00000623680 2534 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PIF1Q9H611 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
PIF1Q9H611 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 MRPL3P1-201ENST00000400109 1033 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.22■□□□□ 0.03
PIF1Q9H611 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
PIF1Q9H611 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.22■□□□□ 0.03
PIF1Q9H611 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 AC148477.8-201ENST00000624298 468 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 AC117500.6-201ENST00000624871 588 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 AC023908.3-201ENST00000564211 3047 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PIF1Q9H611 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 AC018892.3-201ENST00000623986 2499 ntBASIC15.22■□□□□ 0.03
PIF1Q9H611 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.22■□□□□ 0.03
PIF1Q9H611 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PIF1Q9H611 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.22■□□□□ 0.03
PIF1Q9H611 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms